Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548c-3p in MPM Mesothelioma Gordon Cluster 21 Table contains all genes in the MPM Mesothelioma Gordon cluster number 21. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p 79897 RPP21 ribonuclease P/MRP 21kDa subunit [Source:HGNC Symbol;Acc:21300] zzz999 23469 PHF3 PHD finger protein 3 [Source:HGNC Symbol;Acc:8921] T 4548 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:7468] T 54482 CCDC76 coiled-coil domain containing 76 [Source:HGNC Symbol;Acc:25502] T 79053 ALG8 asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23161] zzz999 84641 HIATL1 hippocampus abundant transcript-like 1 [Source:HGNC Symbol;Acc:23376] zzz999 4152 MBD1 methyl-CpG binding domain protein 1 [Source:HGNC Symbol;Acc:6916] T 55812 SPATA7 spermatogenesis associated 7 [Source:HGNC Symbol;Acc:20423] zzz999 64745 METTL17 methyltransferase like 17 [Source:HGNC Symbol;Acc:19280] T 23262 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:29035] T 5000 ORC4 origin recognition complex, subunit 4 [Source:HGNC Symbol;Acc:8490] T 23518 R3HDM1 R3H domain containing 1 [Source:HGNC Symbol;Acc:9757] P T 114327 EFHC1 EF-hand domain (C-terminal) containing 1 [Source:HGNC Symbol;Acc:16406] T 9972 NUP153 nucleoporin 153kDa [Source:HGNC Symbol;Acc:8062] T 79646 PANK3 pantothenate kinase 3 [Source:HGNC Symbol;Acc:19365] T 23414 ZFPM2 zinc finger protein, multitype 2 [Source:HGNC Symbol;Acc:16700] P T 4942 OAT ornithine aminotransferase [Source:HGNC Symbol;Acc:8091] zzz999 3035 HARS histidyl-tRNA synthetase [Source:HGNC Symbol;Acc:4816] T 3945 LDHB lactate dehydrogenase B [Source:HGNC Symbol;Acc:6541] zzz999 80227 PAAF1 proteasomal ATPase-associated factor 1 [Source:HGNC Symbol;Acc:25687] zzz999 3895 KTN1 kinectin 1 (kinesin receptor) [Source:HGNC Symbol;Acc:6467] zzz999 10735 STAG2 stromal antigen 2 [Source:HGNC Symbol;Acc:11355] P T 8766 RAB11A RAB11A, member RAS oncogene family [Source:HGNC Symbol;Acc:9760] P T 23041 MON2 MON2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29177] T 7019 TFAM transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] T 55832 CAND1 cullin-associated and neddylation-dissociated 1 [Source:HGNC Symbol;Acc:30688] P T 55631 LRRC40 leucine rich repeat containing 40 [Source:HGNC Symbol;Acc:26004] T 55228 PNMAL1 PNMA-like 1 [Source:HGNC Symbol;Acc:25578] zzz999 8863 PER3 period homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:8847] T 6049 RNF6 ring finger protein (C3H2C3 type) 6 [Source:HGNC Symbol;Acc:10069] zzz999 9202 ZMYM4 zinc finger, MYM-type 4 [Source:HGNC Symbol;Acc:13055] T 51742 ARID4B AT rich interactive domain 4B (RBP1-like) [Source:HGNC Symbol;Acc:15550] zzz999 51320 MEX3C mex-3 homolog C (C. elegans) [Source:HGNC Symbol;Acc:28040] P T 6428 SRSF3 serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785] P T 6429 SRSF4 serine/arginine-rich splicing factor 4 [Source:HGNC Symbol;Acc:10786] T 78991 PCYOX1L prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:28477] zzz999 54101 RIPK4 receptor-interacting serine-threonine kinase 4 [Source:HGNC Symbol;Acc:496] zzz999 7705 ZNF146 zinc finger protein 146 [Source:HGNC Symbol;Acc:12931] T 1350 COX7C cytochrome c oxidase subunit VIIc [Source:HGNC Symbol;Acc:2292] zzz999 23266 LPHN2 latrophilin 2 [Source:HGNC Symbol;Acc:18582] T 64417 C5orf28 chromosome 5 open reading frame 28 [Source:HGNC Symbol;Acc:26139] T 63917 GALNT11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:HGNC Symbol;Acc:19875] zzz999 10564 ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15853] T 11231 SEC63 SEC63 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21082] T 292 SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:HGNC Symbol;Acc:10991] T 2969 GTF2I general transcription factor IIi [Source:HGNC Symbol;Acc:4659] T 7311 UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] T 51186 WBP5 WW domain binding protein 5 [Source:HGNC Symbol;Acc:30084] P T 23256 SCFD1 sec1 family domain containing 1 [Source:HGNC Symbol;Acc:20726] T 10923 SUB1 SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] zzz999 23548 TTC33 tetratricopeptide repeat domain 33 [Source:HGNC Symbol;Acc:29959] T 4140 MARK3 MAP/microtubule affinity-regulating kinase 3 [Source:HGNC Symbol;Acc:6897] zzz999 8813 DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:HGNC Symbol;Acc:3005] zzz999 9798 KIAA0174 KIAA0174 [Source:HGNC Symbol;Acc:28977] zzz999 9969 MED13 mediator complex subunit 13 [Source:HGNC Symbol;Acc:22474] T 11328 FKBP9 FK506 binding protein 9, 63 kDa [Source:HGNC Symbol;Acc:3725] T 80349 WDR61 WD repeat domain 61 [Source:HGNC Symbol;Acc:30300] zzz999 79573 TTC13 tetratricopeptide repeat domain 13 [Source:HGNC Symbol;Acc:26204] T 55186 SLC25A36 solute carrier family 25, member 36 [Source:HGNC Symbol;Acc:25554] T 26135 SERBP1 SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860] T 79657 RPAP3 RNA polymerase II associated protein 3 [Source:HGNC Symbol;Acc:26151] zzz999 25950 RWDD3 RWD domain containing 3 [Source:HGNC Symbol;Acc:21393] P T 8886 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741] T 5516 PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300] T 79017 GGCT gamma-glutamylcyclotransferase [Source:HGNC Symbol;Acc:21705] T 167227 DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24452] T 1545 CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:2597] T 9702 CEP57 centrosomal protein 57kDa [Source:HGNC Symbol;Acc:30794] P T 6047 RNF4 ring finger protein 4 [Source:HGNC Symbol;Acc:10067] zzz999 144699 FBXL14 F-box and leucine-rich repeat protein 14 [Source:HGNC Symbol;Acc:28624] zzz999 27335 EIF3K eukaryotic translation initiation factor 3, subunit K [Source:HGNC Symbol;Acc:24656] zzz999 22872 SEC31A SEC31 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17052] zzz999 140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882] T 9988 DMTF1 cyclin D binding myb-like transcription factor 1 [Source:HGNC Symbol;Acc:14603] zzz999 6322 SCML1 sex comb on midleg-like 1 (Drosophila) [Source:HGNC Symbol;Acc:10580] zzz999 51439 FAM8A1 family with sequence similarity 8, member A1 [Source:HGNC Symbol;Acc:16372] T 57092 PCNP PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:30023] T 9874 TLK1 tousled-like kinase 1 [Source:HGNC Symbol;Acc:11841] P T 55172 C14orf104 chromosome 14 open reading frame 104 [Source:HGNC Symbol;Acc:20188] zzz999 55254 TMEM39A transmembrane protein 39A [Source:HGNC Symbol;Acc:25600] P T 9685 CLINT1 clathrin interactor 1 [Source:HGNC Symbol;Acc:23186] P T 2627 GATA6 GATA binding protein 6 [Source:HGNC Symbol;Acc:4174] T 284565 NBPF15 neuroblastoma breakpoint family, member 15 [Source:HGNC Symbol;Acc:28791] T 1657 DMXL1 Dmx-like 1 [Source:HGNC Symbol;Acc:2937] T 10434 LYPLA1 lysophospholipase I [Source:HGNC Symbol;Acc:6737] T 56984 PSMG2 proteasome (prosome, macropain) assembly chaperone 2 [Source:HGNC Symbol;Acc:24929] zzz999 2631 GBAS glioblastoma amplified sequence [Source:HGNC Symbol;Acc:4179] T 4953 ODC1 ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:8109] P T 55003 PAK1IP1 PAK1 interacting protein 1 [Source:HGNC Symbol;Acc:20882] T 57122 NUP107 nucleoporin 107kDa [Source:HGNC Symbol;Acc:29914] zzz999 51444 RNF138 ring finger protein 138 [Source:HGNC Symbol;Acc:17765] T 51279 C1RL complement component 1, r subcomponent-like [Source:HGNC Symbol;Acc:21265] T 28978 TMEM14A transmembrane protein 14A [Source:HGNC Symbol;Acc:21076] zzz999 10972 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998] P T 6432 SRSF7 serine/arginine-rich splicing factor 7 [Source:HGNC Symbol;Acc:10789] P T 10363 HMG20A high mobility group 20A [Source:HGNC Symbol;Acc:5001] T 11171 STRAP serine/threonine kinase receptor associated protein [Source:HGNC Symbol;Acc:30796] P T 5286 PIK3C2A phosphoinositide-3-kinase, class 2, alpha polypeptide [Source:HGNC Symbol;Acc:8971] P T 9639 ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 [Source:HGNC Symbol;Acc:14103] T 819 CAMLG calcium modulating ligand [Source:HGNC Symbol;Acc:1471] P T 64848 YTHDC2 YTH domain containing 2 [Source:HGNC Symbol;Acc:24721] T 56947 MFF mitochondrial fission factor [Source:HGNC Symbol;Acc:24858] zzz999 387263 C6orf120 chromosome 6 open reading frame 120 [Source:HGNC Symbol;Acc:21247] zzz999 10140 TOB1 transducer of ERBB2, 1 [Source:HGNC Symbol;Acc:11979] P T 10054 UBA2 ubiquitin-like modifier activating enzyme 2 [Source:HGNC Symbol;Acc:30661] T 51002 TPRKB TP53RK binding protein [Source:HGNC Symbol;Acc:24259] zzz999 11073 TOPBP1 topoisomerase (DNA) II binding protein 1 [Source:HGNC Symbol;Acc:17008] P T 5018 OXA1L oxidase (cytochrome c) assembly 1-like [Source:HGNC Symbol;Acc:8526] zzz999 60561 RINT1 RAD50 interactor 1 [Source:HGNC Symbol;Acc:21876] zzz999 22916 NCBP2 nuclear cap binding protein subunit 2, 20kDa [Source:HGNC Symbol;Acc:7659] T 29093 MRPL22 mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:14480] zzz999 7980 TFPI2 tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:11761] T 10250 SRRM1 serine/arginine repetitive matrix 1 [Source:HGNC Symbol;Acc:16638] P T 5965 RECQL RecQ protein-like (DNA helicase Q1-like) [Source:HGNC Symbol;Acc:9948] T 51729 WBP11 WW domain binding protein 11 [Source:HGNC Symbol;Acc:16461] T 10142 AKAP9 A kinase (PRKA) anchor protein (yotiao) 9 [Source:HGNC Symbol;Acc:379] zzz999 90 ACVR1 activin A receptor, type I [Source:HGNC Symbol;Acc:171] T 23142 DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:HGNC Symbol;Acc:28998] T 3146 HMGB1 high mobility group box 1 [Source:HGNC Symbol;Acc:4983] T 6421 SFPQ splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774] zzz999 5879 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801] zzz999 10236 HNRNPR heterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:5047] zzz999 4191 MDH2 malate dehydrogenase 2, NAD (mitochondrial) [Source:HGNC Symbol;Acc:6971] zzz999 7267 TTC3 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:12393] T 5822 PWP2 PWP2 periodic tryptophan protein homolog (yeast) [Source:HGNC Symbol;Acc:9711] zzz999 9652 TTC37 tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:23639] zzz999 7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586] zzz999 55914 ERBB2IP erbb2 interacting protein [Source:HGNC Symbol;Acc:15842] P T 889 KRIT1 KRIT1, ankyrin repeat containing [Source:HGNC Symbol;Acc:1573] T 5431 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa [Source:HGNC Symbol;Acc:9188] zzz999 60684 C4orf41 chromosome 4 open reading frame 41 [Source:HGNC Symbol;Acc:25751] zzz999 6879 TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa [Source:HGNC Symbol;Acc:11541] zzz999 23291 FBXW11 F-box and WD repeat domain containing 11 [Source:HGNC Symbol;Acc:13607] T 196 AHR aryl hydrocarbon receptor [Source:HGNC Symbol;Acc:348] P T 9126 SMC3 structural maintenance of chromosomes 3 [Source:HGNC Symbol;Acc:2468] zzz999 1487 CTBP1 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:2494] T 3275 PRMT2 protein arginine methyltransferase 2 [Source:HGNC Symbol;Acc:5186] T 25847 ANAPC13 anaphase promoting complex subunit 13 [Source:HGNC Symbol;Acc:24540] zzz999 51441 YTHDF2 YTH domain family, member 2 [Source:HGNC Symbol;Acc:31675] P T 9039 UBA3 ubiquitin-like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:12470] T 23173 METAP1 methionyl aminopeptidase 1 [Source:HGNC Symbol;Acc:15789] T 55164 SHQ1 SHQ1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25543] T 64924 SLC30A5 solute carrier family 30 (zinc transporter), member 5 [Source:HGNC Symbol;Acc:19089] T 5001 ORC5 origin recognition complex, subunit 5 [Source:HGNC Symbol;Acc:8491] zzz999 25972 UNC50 unc-50 homolog (C. elegans) [Source:HGNC Symbol;Acc:16046] zzz999 51012 SLMO2 slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892] P T 8087 FXR1 fragile X mental retardation, autosomal homolog 1 [Source:HGNC Symbol;Acc:4023] T 26046 LTN1 listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:13082] P T 54832 VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:23594] T 5889 RAD51C RAD51 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:9820] zzz999 9440 MED17 mediator complex subunit 17 [Source:HGNC Symbol;Acc:2375] T 8887 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 [Source:HGNC Symbol;Acc:11575] T 5921 RASA1 RAS p21 protein activator (GTPase activating protein) 1 [Source:HGNC Symbol;Acc:9871] zzz999 56257 MEPCE methylphosphate capping enzyme [Source:HGNC Symbol;Acc:20247] zzz999 51650 MRPS33 mitochondrial ribosomal protein S33 [Source:HGNC Symbol;Acc:16634] zzz999 440307 TTLL13 tubulin tyrosine ligase-like family, member 13 [Source:HGNC Symbol;Acc:32484] zzz999 56339 METTL3 methyltransferase like 3 [Source:HGNC Symbol;Acc:17563] zzz999 10915 TCERG1 transcription elongation regulator 1 [Source:HGNC Symbol;Acc:15630] P T 1615 DARS aspartyl-tRNA synthetase [Source:HGNC Symbol;Acc:2678] T 51373 MRPS17 mitochondrial ribosomal protein S17 [Source:HGNC Symbol;Acc:14047] zzz999 221154 EFHA1 EF-hand domain family, member A1 [Source:HGNC Symbol;Acc:31830] T 3612 IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 [Source:HGNC Symbol;Acc:6050] T 4094 MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) [Source:HGNC Symbol;Acc:6776] P T

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